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dc.contributor.author
de Oliveira Silva, Franklin Magnum
dc.contributor.author
Lichtenstein, Gabriel
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Alseekh, Saleh
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Rosado Souza, Laise
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Conte, Mariana
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Suguiyama, Vanessa Fuentes
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Lira, Bruno Silvestre
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Fanourakis, Dimitrios
dc.contributor.author
Usadel, Björn
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Bhering, Leonardo Lopes
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DaMatta, Fábio M.
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Sulpice, Ronan
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Araújo, Wagner L.
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Rossi, Magdalena
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de Setta, Nathalia
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Fernie, Alisdair R.
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Carrari, Fernando Oscar
dc.contributor.author
Nunes Nesi, Adriano
dc.date.available
2019-10-16T20:28:50Z
dc.date.issued
2018-02
dc.identifier.citation
de Oliveira Silva, Franklin Magnum; Lichtenstein, Gabriel; Alseekh, Saleh; Rosado Souza, Laise; Conte, Mariana; et al.; The genetic architecture of photosynthesis and plant growth-related traits in tomato; Wiley Blackwell Publishing, Inc; Plant, Cell and Environment; 41; 2; 2-2018; 327-341
dc.identifier.issn
0140-7791
dc.identifier.uri
http://hdl.handle.net/11336/86087
dc.description.abstract
To identify genomic regions involved in the regulation of fundamental physiological processes such as photosynthesis and respiration, a population of Solanum pennellii introgression lines was analyzed. We determined phenotypes for physiological, metabolic, and growth related traits, including gas exchange and chlorophyll fluorescence parameters. Data analysis allowed the identification of 208 physiological and metabolic quantitative trait loci with 33 of these being associated to smaller intervals of the genomic regions, termed BINs. Eight BINs were identified that were associated with higher assimilation rates than the recurrent parent M82. Two and 10 genomic regions were related to shoot and root dry matter accumulation, respectively. Nine genomic regions were associated with starch levels, whereas 12 BINs were associated with the levels of other metabolites. Additionally, a comprehensive and detailed annotation of the genomic regions spanning these quantitative trait loci allowed us to identify 87 candidate genes that putatively control the investigated traits. We confirmed 8 of these at the level of variance in gene expression. Taken together, our results allowed the identification of candidate genes that most likely regulate photosynthesis, primary metabolism, and plant growth and as such provide new avenues for crop improvement.
dc.format
application/pdf
dc.language.iso
eng
dc.publisher
Wiley Blackwell Publishing, Inc
dc.rights
info:eu-repo/semantics/openAccess
dc.rights.uri
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.subject
INTROGRESSION LINES
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PRIMARY METABOLISM
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QUANTITATIVE TRAIT LOCI
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Otras Ciencias Biológicas
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Ciencias Biológicas
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CIENCIAS NATURALES Y EXACTAS
dc.title
The genetic architecture of photosynthesis and plant growth-related traits in tomato
dc.type
info:eu-repo/semantics/article
dc.type
info:ar-repo/semantics/artículo
dc.type
info:eu-repo/semantics/publishedVersion
dc.date.updated
2019-10-10T14:59:03Z
dc.journal.volume
41
dc.journal.number
2
dc.journal.pagination
327-341
dc.journal.pais
Reino Unido
dc.journal.ciudad
Londres
dc.description.fil
Fil: de Oliveira Silva, Franklin Magnum. Universidade Federal de Viçosa; Brasil
dc.description.fil
Fil: Lichtenstein, Gabriel. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Biotecnología; Argentina
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Fil: Alseekh, Saleh. Max Planck Institute of Molecular Plant Physiology; Alemania
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Fil: Rosado Souza, Laise. Max Planck Institute of Molecular Plant Physiology; Alemania
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Fil: Conte, Mariana. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Biotecnología; Argentina
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Fil: Suguiyama, Vanessa Fuentes. Universidade Federal do ABC; Brasil
dc.description.fil
Fil: Lira, Bruno Silvestre. Universidade de Sao Paulo; Brasil
dc.description.fil
Fil: Fanourakis, Dimitrios. Vegetable Crops and Plant Protection; Grecia
dc.description.fil
Fil: Usadel, Björn. RWTH Aachen University; Alemania. Forschungszentrum Jülich; Alemania
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Fil: Bhering, Leonardo Lopes. Universidade Federal de Viçosa; Brasil
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Fil: DaMatta, Fábio M.. Universidade Federal de Viçosa; Brasil
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Fil: Sulpice, Ronan. National University of Ireland Galway; Irlanda
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Fil: Araújo, Wagner L.. Universidade Federal de Viçosa; Brasil
dc.description.fil
Fil: Rossi, Magdalena. Universidade de Sao Paulo; Brasil
dc.description.fil
Fil: de Setta, Nathalia. Universidade Federal do ABC; Brasil
dc.description.fil
Fil: Fernie, Alisdair R.. Max Planck Institute of Molecular Plant Physiology; Alemania
dc.description.fil
Fil: Carrari, Fernando Oscar. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Biotecnología; Argentina
dc.description.fil
Fil: Nunes Nesi, Adriano. Universidade Federal de Viçosa; Brasil
dc.journal.title
Plant, Cell and Environment
dc.relation.alternativeid
info:eu-repo/semantics/altIdentifier/doi/http://dx.doi.org/10.1111/pce.13084
dc.relation.alternativeid
info:eu-repo/semantics/altIdentifier/url/https://onlinelibrary.wiley.com/doi/abs/10.1111/pce.13084
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