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Artículo

Kin-Driver: a Database of Driver Mutations in Protein Kinases

Simonetti, Franco LucioIcon ; Tornador, Cristian; Nabau Moretó, Nuria; Molina Vila, Miguel A.; Marino Buslje, Cristina
Fecha de publicación: 2014
Editorial: Oxford University Press
Revista: Database: The Journal of Biological Databases and Curation
ISSN: 1758-0463
Idioma: Inglés
Tipo de recurso: Artículo publicado
Clasificación temática:
Ciencias de la Información y Bioinformática

Resumen

Somatic mutations in protein kinases (PKs) are frequent driver events in many human tumors, while germ-line mutations are associated with hereditary diseases. Here we present Kin-driver, the first database that compiles driver mutations in PKs with experimental evidence demonstrating their functional role. Kin-driver is a manual expert-curated database that pays special attention to activating mutations (AMs) and can serve as a validation set to develop new generation tools focused on the prediction of gain-of-function driver mutations. It also offers an easy and intuitive environment to facilitate the visualization and analysis of mutations in PKs. Because all mutations are mapped onto a multiple sequence alignment, analogue positions between kinases can be identified and tentative new mutations can be proposed for studying by transferring annotation. Finally, our database can also be of use to clinical and translational laboratories, helping them to identify uncommon AMs that can correlate with response to new antitumor drugs. The website was developed using PHP and JavaScript, which are supported by all major browsers; the database was built using MySQL server. Kin-driver is available at: http://kin-driver.leloir.org.ar/
Palabras clave: Kinases , Driver Mutation , Database , Cancer
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info:eu-repo/semantics/openAccess Excepto donde se diga explícitamente, este item se publica bajo la siguiente descripción: Creative Commons Attribution-NonCommercial-ShareAlike 2.5 Unported (CC BY-NC-SA 2.5)
Identificadores
URI: http://hdl.handle.net/11336/8348
URL: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4237945/
URL: http://database.oxfordjournals.org/content/2014/bau104
DOI: http://dx.doi.org/10.1093/database/bau104
Colecciones
Articulos(IIBBA)
Articulos de INST.DE INVEST.BIOQUIMICAS DE BS.AS(I)
Citación
Simonetti, Franco Lucio; Tornador, Cristian; Nabau Moretó, Nuria; Molina Vila, Miguel A.; Marino Buslje, Cristina; Kin-Driver: a Database of Driver Mutations in Protein Kinases; Oxford University Press; Database: The Journal of Biological Databases and Curation; 2014; -1-2014; bau104
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