Mostrar el registro sencillo del ítem
dc.contributor.author
Bonacina, Julieta
dc.contributor.author
Suárez, Nadia Elina
dc.contributor.author
Hormigo, Daniel Ricardo
dc.contributor.author
Fadda, Silvina G.
dc.contributor.author
Lechner, Marcus
dc.contributor.author
Saavedra, Maria Lucila
dc.date.available
2017-12-13T16:23:00Z
dc.date.issued
2017-02-01
dc.identifier.citation
Bonacina, Julieta; Suárez, Nadia Elina; Hormigo, Daniel Ricardo; Fadda, Silvina G.; Lechner, Marcus; et al.; A genomic view of food-related and probiotic Enterococcus strains; Oxford University Press; Dna Research; 24; 1; 1-2-2017; 11-24
dc.identifier.issn
1340-2838
dc.identifier.uri
http://hdl.handle.net/11336/30415
dc.description.abstract
The study of enterococcal genomes has grown considerably in recent years. While special attentionis paid to comparative genomic analysis among clinical relevant isolates, in this study we performedan exhaustive comparative analysis of enterococcal genomes of food origin and/or with potential tobe used as probiotics. Beyond common genetic features, we especially aimed to identify those thatare specific to enterococcal strains isolated from a certain food-related source as well as features presentin a species-specific manner. Thus, the genome sequences of 25 Enterococcus strains, from 7different species, were examined and compared. Their phylogenetic relationship was reconstructedbased on orthologous proteins and whole genomes. Likewise, markers associated with a successfulcolonization (bacteriocin genes and genomic islands) and genome plasticity (phages and clusteredregularly interspaced short palindromic repeats) were investigated for lifestyle specific genetic features.At the same time, a search for antibiotic resistance genes was carried out, since they are of bigconcern in the food industry. Finally, it was possible to locate 1617 FIGfam families as a core proteomeuniversally present among the genera and to determine that most of the accessory genes codefor hypothetical proteins, providing reasonable hints to support their functional characterization.
dc.format
application/pdf
dc.language.iso
eng
dc.publisher
Oxford University Press
dc.rights
info:eu-repo/semantics/openAccess
dc.rights.uri
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.subject
Enterococcus
dc.subject
Food
dc.subject
Genomics
dc.subject
Niche
dc.subject
Probiotics
dc.subject.classification
Otras Ciencias Biológicas
dc.subject.classification
Ciencias Biológicas
dc.subject.classification
CIENCIAS NATURALES Y EXACTAS
dc.title
A genomic view of food-related and probiotic Enterococcus strains
dc.type
info:eu-repo/semantics/article
dc.type
info:ar-repo/semantics/artículo
dc.type
info:eu-repo/semantics/publishedVersion
dc.date.updated
2017-12-04T18:20:57Z
dc.identifier.eissn
1756-1663
dc.journal.volume
24
dc.journal.number
1
dc.journal.pagination
11-24
dc.journal.pais
Reino Unido
dc.journal.ciudad
Oxford
dc.description.fil
Fil: Bonacina, Julieta. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Centro de Referencia Para Lactobacilos; Argentina
dc.description.fil
Fil: Suárez, Nadia Elina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Centro de Referencia Para Lactobacilos; Argentina
dc.description.fil
Fil: Hormigo, Daniel Ricardo. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Centro de Referencia Para Lactobacilos; Argentina
dc.description.fil
Fil: Fadda, Silvina G.. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Centro de Referencia Para Lactobacilos; Argentina
dc.description.fil
Fil: Lechner, Marcus. University Marburg; Alemania
dc.description.fil
Fil: Saavedra, Maria Lucila. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Tucuman. Centro de Referencia Para Lactobacilos; Argentina
dc.journal.title
Dna Research
dc.relation.alternativeid
info:eu-repo/semantics/altIdentifier/url/https://academic.oup.com/dnaresearch/issue
dc.relation.alternativeid
info:eu-repo/semantics/altIdentifier/doi/http://dx.doi.org/10.1093/dnares/dsw043
dc.relation.alternativeid
info:eu-repo/semantics/altIdentifier/url/https://academic.oup.com/dnaresearch/article/24/1/11/2670108
Archivos asociados