Evento

Creating 2D Occupancy Plots Using plot2DO

Beati, Maria PaulaIcon ; Chereji, Razvan V.
Tipo del evento: Conferencia
Nombre del evento: BioC 2020: Where Software and Biology Connect
Fecha del evento: 27/07/2020
Institución Organizadora: Bioconductor Comité Organizador;
Título de la revista: F1000Research
Editorial: F1000Research
ISSN: 2046-1402
Idioma: Inglés
Clasificación temática:

Resumen

The 2D occupancy (2DO) plot is useful for an initial quality check of MNase-seq data, in order to assess the degree of chromatin digestion, and also for getting insights about the nucleosome organization, as well as about the MNase digestion kinetics.plot2DO is a flexible tool for evaluating the quality of MNase-seq and MNase-ChIP-seq data, and for visualizing the distribution of nucleosomes near the functional regions of the genome.
Palabras clave: MNaseSeq , NucleosomePositioning , Visualization , Software
 
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info:eu-repo/semantics/openAccess Excepto donde se diga explícitamente, este item se publica bajo la siguiente descripción: Creative Commons Attribution 2.5 Unported (CC BY 2.5)
Identificadores
URI: http://hdl.handle.net/11336/201398
DOI: https://doi.org/10.7490/f1000research.1118043.1
URL: https://f1000research.com/slides/9-724
URL: http://bioc2020.bioconductor.org/
Colecciones
Eventos(INGEBI)
Eventos de INST.DE INVEST.EN ING.GENETICA Y BIOL.MOLECULAR "DR. HECTOR N TORRES"
Citación
Creating 2D Occupancy Plots Using plot2DO; BioC 2020: Where Software and Biology Connect; Boston; Estados Unidos; 2020; 1-8
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