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dc.contributor.author
Torrico, A. K.
dc.contributor.author
Celli, Marcos Giovani
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Cafrune, Eva Encarnacion
dc.contributor.author
Kirschbaum, Daniel Santiago
dc.contributor.author
Conci, Vilma Cecilia
dc.date.available
2022-12-01T14:55:15Z
dc.date.issued
2016-06
dc.identifier.citation
Torrico, A. K.; Celli, Marcos Giovani; Cafrune, Eva Encarnacion; Kirschbaum, Daniel Santiago; Conci, Vilma Cecilia; Genetic variability and recombination analysis of the coat protein gene of Strawberry mild yellow edge virus; Springer; Australasian Plant Pathology; 45; 4; 6-2016; 401-409
dc.identifier.issn
0815-3191
dc.identifier.uri
http://hdl.handle.net/11336/179813
dc.description.abstract
Strawberry mild yellow edge virus (SMYEV) has been detected in most of the strawberry production regions worldwide. However, little is known about differences between distinct isolates. The aim of this study was to enhance the knowledge about the genetic variability of different SMYEV isolates, exploring the phylogenetic relationships and assessing recombinant events among them. The coat protein (CP) gene of 12 Argentinian SMYEV isolates was sequenced. There were 729 nucleotides (nt) in all of the isolates, encoding a protein of 242 amino acids (aa). Argentina isolates shared 81.5–99.6 % nucleotide identity. The comparison of these isolates with 30 SMYEV sequences from other countries published in the GenBank, revealed an identity ranging from 81.6 to 99 %. The phylogenetic analysis showed the presence of four possible subgroups, with the Argentinian isolates being included in all of them. Recombination analysis indicated that 16–2 (KP 284155) Argentinian and AJ577342 Chilean isolates are recombinant and that they are a result of recombination events where parts of the genome were exchanged between different SMYEV sequences.
dc.format
application/pdf
dc.language.iso
eng
dc.publisher
Springer
dc.rights
info:eu-repo/semantics/openAccess
dc.rights.uri
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.subject
FRAGARIA X ANANASSA
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MOLECULAR CHARACTERIZATION
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PHYLOGENETIC ANALYSIS
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POTEXVIRUS
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SMYEV
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Otras Ciencias Agrícolas
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Otras Ciencias Agrícolas
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CIENCIAS AGRÍCOLAS
dc.title
Genetic variability and recombination analysis of the coat protein gene of Strawberry mild yellow edge virus
dc.type
info:eu-repo/semantics/article
dc.type
info:ar-repo/semantics/artículo
dc.type
info:eu-repo/semantics/publishedVersion
dc.date.updated
2022-11-30T22:37:51Z
dc.journal.volume
45
dc.journal.number
4
dc.journal.pagination
401-409
dc.journal.pais
Australia
dc.journal.ciudad
Collingwood
dc.description.fil
Fil: Torrico, A. K.. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigaciones Agropecuarias. Instituto de Patología Vegetal; Argentina
dc.description.fil
Fil: Celli, Marcos Giovani. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba; Argentina. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigaciones Agropecuarias. Instituto de Patología Vegetal; Argentina
dc.description.fil
Fil: Cafrune, Eva Encarnacion. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigaciones Agropecuarias. Instituto de Patología Vegetal; Argentina
dc.description.fil
Fil: Kirschbaum, Daniel Santiago. Instituto Nacional de Tecnología Agropecuaria. Centro Regional Tucuman-Santiago del Estero. Estación Experimental Agropecuaria Famaillá; Argentina
dc.description.fil
Fil: Conci, Vilma Cecilia. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigaciones Agropecuarias. Instituto de Patología Vegetal; Argentina. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba; Argentina
dc.journal.title
Australasian Plant Pathology
dc.relation.alternativeid
info:eu-repo/semantics/altIdentifier/url/https://link.springer.com/article/10.1007/s13313-016-0426-3
dc.relation.alternativeid
info:eu-repo/semantics/altIdentifier/doi/http://dx.doi.org/10.1007/s13313-016-0426-3
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