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dc.contributor.author
Arce, Debora Pamela
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dc.contributor.author
De Las Rivas, Javier
dc.contributor.author
Pratta, Guillermo Raúl
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dc.date.available
2022-07-28T13:40:25Z
dc.date.issued
2020-03
dc.identifier.citation
Arce, Debora Pamela; De Las Rivas, Javier; Pratta, Guillermo Raúl; Interactomic analysis of the sHSP family during tomato fruit ripening; Elsevier; Plant Gene; 21; 3-2020; 1-8
dc.identifier.issn
2352-4073
dc.identifier.uri
http://hdl.handle.net/11336/163384
dc.description.abstract
Sstochastic mall Heat Shock Proteins (sHSPs) are chaperones related to abiotic stress response and development that have been characterized in different organisms. In plants, evolutionary relationships, differential gene expression and HSE-dependent gene regulation of tomato sHSP family was described by different groups in an exploratory approach. This work enhances a bioinformatic and inferential approach based on PPI network building using previously reported transcriptomic and proteomic curated datasets. We were able to identify the already described core set of eight sHSPs showing different subcellular localization. Additionally, new putative sHSP-protein interactors during fruit ripening were defined. Between them, HSP70 members, chaperones (DnaK, DnaJ), GST and Universal Stress Protein are the main proteins associated to biological processes involved in response to heat, abiotic stress, protein folding and development. Finally, protein expression of these interactors depends on the presence of HSE and CTAGA-motifs in their gene promoter regions, suggesting Hsf-dependent regulation. Our inferential and integrative bioinformatic approach led us to identify new possible biological roles for subsets of genes/proteins in a system biology point of view, during tomato fruit ripening.
dc.format
application/pdf
dc.language.iso
eng
dc.publisher
Elsevier
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dc.rights
info:eu-repo/semantics/restrictedAccess
dc.rights.uri
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.subject
INTERACTOMICS
dc.subject
RIPENING
dc.subject
SHSPS
dc.subject
TOMATO
dc.subject.classification
Otras Ciencias Biológicas
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dc.subject.classification
Ciencias Biológicas
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dc.subject.classification
CIENCIAS NATURALES Y EXACTAS
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dc.title
Interactomic analysis of the sHSP family during tomato fruit ripening
dc.type
info:eu-repo/semantics/article
dc.type
info:ar-repo/semantics/artículo
dc.type
info:eu-repo/semantics/publishedVersion
dc.date.updated
2021-09-06T21:16:23Z
dc.journal.volume
21
dc.journal.pagination
1-8
dc.journal.pais
Países Bajos
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dc.journal.ciudad
Amsterdam
dc.description.fil
Fil: Arce, Debora Pamela. Consejo Nacional de Investigaciones Cientificas y Tecnicas. Centro de Investigaciones y Transferencia de San Nicolas. - Universidad Tecnologica Nacional. Facultad Reg.san Nicolas. Centro de Investigaciones y Transferencia de San Nicolas.; Argentina
dc.description.fil
Fil: De Las Rivas, Javier. Consejo Superior de Investigaciones Científicas; España
dc.description.fil
Fil: Pratta, Guillermo Raúl. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Rosario. Instituto de Investigaciones en Ciencias Agrarias de Rosario. Universidad Nacional de Rosario. Facultad de Ciencias Agrarias. Instituto de Investigaciones en Ciencias Agrarias de Rosario; Argentina
dc.journal.title
Plant Gene
dc.relation.alternativeid
info:eu-repo/semantics/altIdentifier/url/https://linkinghub.elsevier.com/retrieve/pii/S2352407319300411
dc.relation.alternativeid
info:eu-repo/semantics/altIdentifier/doi/http://dx.doi.org/10.1016/j.plgene.2019.100208
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