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dc.contributor.author
Moing, Annick
dc.contributor.author
William Allwood, J.
dc.contributor.author
Aharoni, Asaph
dc.contributor.author
Baker, John
dc.contributor.author
Beale, Michael H.
dc.contributor.author
Ben-Dor, Shifra
dc.contributor.author
Biais, Benoît
dc.contributor.author
Brigante, Federico Iván
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dc.contributor.author
Burger, Yosef
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Deborde, Catherine
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Erban, Alexander
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Faigenboim, Adi
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Gur, Amit
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Goodacre, Royston
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Hansen, Thomas H.
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Jacob, Daniel
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Katzir, Nurit
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Kopka, Joachim
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Lewinsohn, Efraim
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Maucourt, Mickael
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Meir, Sagit
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Miller, Sonia
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Mumm, Roland
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Oren, Elad
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Paris, Harry S.
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Rogachev, Ilana
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Rolin, Dominique
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Saar, Uzi
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Schjoerring, Jan K.
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Tadmor, Yaakov
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Tzuri, Galil
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de Vos, Ric C. H.
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Ward, Jane L.
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Yeselson, Elena
dc.contributor.author
Hall, Robert D.
dc.contributor.author
Schaffer, Arthur A.
dc.date.available
2021-10-21T13:07:50Z
dc.date.issued
2020-03-24
dc.identifier.citation
Moing, Annick; William Allwood, J.; Aharoni, Asaph; Baker, John; Beale, Michael H.; et al.; Comparative metabolomics and molecular phylogenetics of melon (Cucumis melo, cucurbitaceae) biodiversity; MDPI; Metabolites; 10; 3; 24-3-2020; 1-26
dc.identifier.uri
http://hdl.handle.net/11336/144596
dc.description.abstract
The broad variability of Cucumis melo (melon, Cucurbitaceae) presents a challenge to conventional classification and organization within the species. To shed further light on the infraspecific relationships within C. melo, we compared genotypic and metabolomic similarities among 44 accessions representative of most of the cultivar-groups. Genotyping-by-sequencing (GBS) provided over 20,000 single-nucleotide polymorphisms (SNPs). Metabolomics data of the mature fruit flesh and rind provided over 80,000 metabolomic and elemental features via an orchestra of six complementary metabolomic platforms. These technologies probed polar, semi-polar, and non-polar metabolite fractions as well as a set of mineral elements and included both flavor-and taste-relevant volatile and non-volatile metabolites. Together these results enabled an estimate of “metabolomic/elemental distance” and its correlation with the genetic GBS distance of melon accessions. This study indicates that extensive and non-targeted metabolomics/elemental characterization produced classifications that strongly, but not completely, reflect the current and extensive genetic classification. Certain melon Groups, such as Inodorous, clustered in parallel with the genetic classifications while other genome to metabolome/element associations proved less clear. We suggest that the combined genomic, metabolic, and element data reflect the extensive sexual compatibility among melon accessions and the breeding history that has, for example, targeted metabolic quality traits, such as taste and flavor.
dc.format
application/pdf
dc.language.iso
eng
dc.publisher
MDPI
dc.rights
info:eu-repo/semantics/openAccess
dc.rights.uri
https://creativecommons.org/licenses/by/2.5/ar/
dc.subject
CUCUMIS MELO
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ELEMENTAL ANALYSIS
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GENETIC RESOURCES
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GENOTYPE BY SEQUENCING
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MELON
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METABOLOME
dc.subject.classification
Otras Ciencias Químicas
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dc.subject.classification
Ciencias Químicas
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dc.subject.classification
CIENCIAS NATURALES Y EXACTAS
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dc.title
Comparative metabolomics and molecular phylogenetics of melon (Cucumis melo, cucurbitaceae) biodiversity
dc.type
info:eu-repo/semantics/article
dc.type
info:ar-repo/semantics/artículo
dc.type
info:eu-repo/semantics/publishedVersion
dc.date.updated
2021-10-12T15:54:48Z
dc.identifier.eissn
2218-1989
dc.journal.volume
10
dc.journal.number
3
dc.journal.pagination
1-26
dc.journal.pais
Suiza
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dc.journal.ciudad
Basilea
dc.description.fil
Fil: Moing, Annick. Universite de Bordeaux; Francia
dc.description.fil
Fil: William Allwood, J.. The James Hutton Institute; Reino Unido
dc.description.fil
Fil: Aharoni, Asaph. Weizmann Institute Of Science Israel; Israel
dc.description.fil
Fil: Baker, John. Rothamsted Research; Reino Unido
dc.description.fil
Fil: Beale, Michael H.. Rothamsted Research; Reino Unido
dc.description.fil
Fil: Ben-Dor, Shifra. Weizmann Institute Of Science Israel; Israel
dc.description.fil
Fil: Biais, Benoît. Universite de Bordeaux; Francia
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Fil: Brigante, Federico Iván. Max Planck Institute Of Molecular Plant Physiology; Alemania. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Conicet - Córdoba. Instituto de Ciencia y Tecnología de Alimentos Córdoba. Universidad Nacional de Córdoba. Facultad de Ciencias Químicas. Instituto de Ciencia y Tecnología de Alimentos Córdoba; Argentina
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Fil: Burger, Yosef. Agricultural Research Organization Of Israel; Israel
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Fil: Deborde, Catherine. Universite de Bordeaux; Francia
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Fil: Erban, Alexander. Max Planck Institute Of Molecular Plant Physiology; Alemania
dc.description.fil
Fil: Faigenboim, Adi. Agricultural Research Organization Of Israel; Israel
dc.description.fil
Fil: Gur, Amit. Agricultural Research Organization Of Israel; Israel
dc.description.fil
Fil: Goodacre, Royston. University of Liverpool; Reino Unido
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Fil: Hansen, Thomas H.. Universidad de Copenhagen; Dinamarca
dc.description.fil
Fil: Jacob, Daniel. Universite de Bordeaux; Francia
dc.description.fil
Fil: Katzir, Nurit. Agricultural Research Organization Of Israel; Israel
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Fil: Kopka, Joachim. Max Planck Institute Of Molecular Plant Physiology; Alemania
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Fil: Lewinsohn, Efraim. Agricultural Research Organization Of Israel; Israel
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Fil: Maucourt, Mickael. Universite de Bordeaux; Francia
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Fil: Meir, Sagit. Weizmann Institute Of Science Israel; Israel
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Fil: Miller, Sonia. Rothamsted Research; Reino Unido
dc.description.fil
Fil: Mumm, Roland. Wageningen University & Países Bajos
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Fil: Oren, Elad. Agricultural Research Organization Of Israel; Israel
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Fil: Paris, Harry S.. Agricultural Research Organization Of Israel; Israel
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Fil: Rogachev, Ilana. Weizmann Institute Of Science Israel; Israel
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Fil: Rolin, Dominique. Universite de Bordeaux; Francia
dc.description.fil
Fil: Saar, Uzi. Agricultural Research Organization Of Israel; Israel
dc.description.fil
Fil: Schjoerring, Jan K.. Universidad de Copenhagen; Dinamarca
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Fil: Tadmor, Yaakov. Agricultural Research Organization Of Israel; Israel
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Fil: Tzuri, Galil. Agricultural Research Organization Of Israel; Israel
dc.description.fil
Fil: de Vos, Ric C. H.. Wageningen University & Países Bajos
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Fil: Ward, Jane L.. Rothamsted Research; Reino Unido
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Fil: Yeselson, Elena. Agricultural Research Organization Of Israel; Israel
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Fil: Hall, Robert D.. Wageningen University & Países Bajos
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Fil: Schaffer, Arthur A.. Agricultural Research Organization Of Israel; Israel
dc.journal.title
Metabolites
dc.relation.alternativeid
info:eu-repo/semantics/altIdentifier/doi/http://dx.doi.org/10.3390/metabo10030121
dc.relation.alternativeid
info:eu-repo/semantics/altIdentifier/url/https://pubmed.ncbi.nlm.nih.gov/32213984/
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