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dc.contributor.author
Ten Have, Arjen
dc.contributor.author
Amselem, Joelle
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Cuomo, Christina A.
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Jan, A. L. van Kan
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Viaud, Muriel
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Benito, Ernesto P.
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Couloux, Arnaud
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Coutinho, Pedro M.
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Vries, Ronald P. de
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Dyer, Paul S.
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Fillinger, Sabine
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Fournier, Elisabeth
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Gout, Lilian
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Hahn, Matthias
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Kohn, Linda
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Lapalu, Nicolas
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Plummer, Kim M.
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Pradier, Jean-Marc
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Quévillon, Emmanuel
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Sharon, Amir
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Simon, Adeline
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Tudzynski, Bettina
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Tudzynski, Paul
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Wincker, Patrick
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Andrew, Marion
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Anthouard, Véronique
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Beever, Ross E.
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Beffa, Rolland
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Benoit, Isabelle
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Bouzid, Ourdia
dc.date.available
2017-02-24T20:18:18Z
dc.date.issued
2011-08
dc.identifier.citation
Ten Have, Arjen; Amselem, Joelle; Cuomo, Christina A.; Jan, A. L. van Kan; Viaud, Muriel; et al.; Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea; Public Library of Science; Plos Genetics; 7; 8; 8-2011; 1-27
dc.identifier.issn
1553-7390
dc.identifier.uri
http://hdl.handle.net/11336/13405
dc.description.abstract
Sclerotinia sclerotiorum and Botrytis cinerea are closely related necrotrophic plant pathogenic fungi notable for their wide host ranges and environmental persistence. These attributes have made these species models for understanding the complexity of necrotrophic, broad host-range pathogenicity. Despite their similarities, the two species differ in mating behaviour and the ability to produce asexual spores. We have sequenced the genomes of one strain of S. sclerotiorum and two strains of B. cinerea. The comparative analysis of these genomes relative to one another and to other sequenced fungal genomes is provided here. Their 38–39 Mb genomes include 11,860–14,270 predicted genes, which share 83% amino acid identity on average between the two species. We have mapped the S. sclerotiorum assembly to 16 chromosomes and found large-scale co-linearity with the B. cinerea genomes. Seven percent of the S. sclerotiorum genome comprises transposable elements compared to <1% of B. cinerea. The arsenal of genes associated with necrotrophic processes is similar between the species, including genes involved in plant cell wall degradation and oxalic acid production. Analysis of secondary metabolism gene clusters revealed an expansion in number and diversity of B. cinerea–specific secondary metabolites relative to S. sclerotiorum. The potential diversity in secondary metabolism might be involved in adaptation to specific ecological niches. Comparative genome analysis revealed the basis of differing sexual mating compatibility systems between S. sclerotiorum and B. cinerea. The organization of the mating-type loci differs, and their structures provide evidence for the evolution of heterothallism from homothallism. These data shed light on the evolutionary and mechanistic bases of the genetically complex traits of necrotrophic pathogenicity and sexual mating. This resource should facilitate the functional studies designed to better understand what makes these fungi such successful and persistent pathogens of agronomic crops.
dc.format
application/pdf
dc.language.iso
eng
dc.publisher
Public Library of Science
dc.rights
info:eu-repo/semantics/openAccess
dc.rights.uri
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.subject
Gray Mould
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White Mould
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Genome Analysis
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Genome Sequence
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Biología Celular, Microbiología
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Ciencias Biológicas
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CIENCIAS NATURALES Y EXACTAS
dc.title
Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea
dc.type
info:eu-repo/semantics/article
dc.type
info:ar-repo/semantics/artículo
dc.type
info:eu-repo/semantics/publishedVersion
dc.date.updated
2017-02-21T14:38:21Z
dc.journal.volume
7
dc.journal.number
8
dc.journal.pagination
1-27
dc.journal.pais
Estados Unidos
dc.journal.ciudad
San Francisco
dc.description.fil
Fil: Ten Have, Arjen. Consejo Nacional de Investigaciones Científicas y Técnicas. Centro Científico Tecnológico Mar del Plata. Instituto de Investigaciones Biológicas; Argentina. Universidad Nacional de Mar del Plata. Facultad de Ciencias Exactas y Naturales. Instituto de Investigaciones Biológicas; Argentina
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Fil: Amselem, Joelle. Institut National de la Recherche Agronomique; Francia
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Fil: Cuomo, Christina A.. Broad Institute of MIT and Harvard; Estados Unidos
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Fil: Jan, A. L. van Kan. Wageningen University; Países Bajos
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Fil: Viaud, Muriel. Institut National de la Recherche Agronomique; Francia
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Fil: Benito, Ernesto P.. Universidad de Salamanca; España
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Fil: Couloux, Arnaud. Centre National de Séquençage. Genoscope; Francia
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Fil: Coutinho, Pedro M.. Centre National de la Recherche Scientifique; Francia
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Fil: Vries, Ronald P. de. Microbiology and Kluyver Centre for Genomics of Industrial Fermentations; Países Bajos. Fungal Biodiversity Centre; Países Bajos
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Fil: Dyer, Paul S.. The University Of Nottingham; Reino Unido
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Fil: Fillinger, Sabine. Institut National de la Recherche Agronomique; Francia
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Fil: Fournier, Elisabeth. Institut National de la Recherche Agronomique; Francia. Centre de coopération internationale en recherche agronomique pour le développement; Francia
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Fil: Gout, Lilian. Institut National de la Recherche Agronomique; Francia
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Fil: Hahn, Matthias. University Of Kaiserlautern; Alemania
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Fil: Kohn, Linda. University Of Toronto; Canadá
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Fil: Lapalu, Nicolas. Institut National de la Recherche Agronomique; Francia
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Fil: Plummer, Kim M.. la Trobe University; Australia
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Fil: Pradier, Jean-Marc. Institut National de la Recherche Agronomique; Francia
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Fil: Quévillon, Emmanuel. Institut National de la Recherche Agronomique; Francia. Centre National de la Recherche Scientifique; Francia
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Fil: Sharon, Amir. Tel Aviv University. Department of Molecular Biology and Ecology of Plants; Israel
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Fil: Simon, Adeline. Institut National de la Recherche Agronomique; Francia
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Fil: Tudzynski, Bettina. Institut für Biologie und Biotechnologie der Pflanzen; Alemania
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Fil: Tudzynski, Paul. Institut für Biologie und Biotechnologie der Pflanzen; Alemania
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Fil: Wincker, Patrick. Centre National de Séquençage. Genoscope; Francia
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Fil: Andrew, Marion. University Of Toronto; Canadá
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Fil: Anthouard, Véronique. Centre National de Séquençage. Genoscope; Francia
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Fil: Beever, Ross E.. Landcare Research; Nueva Zelanda
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Fil: Beffa, Rolland. Centre National de la Recherche Scientifique; Francia
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Fil: Benoit, Isabelle . Microbiology and Kluyver Centre for Genomics of Industrial Fermentations; Países Bajos
dc.description.fil
Fil: Bouzid, Ourdia. Microbiology and Kluyver Centre for Genomics of Industrial Fermentations; Países Bajos
dc.journal.title
Plos Genetics
dc.relation.alternativeid
info:eu-repo/semantics/altIdentifier/url/http://www.plosgenetics.org/article/info%3Adoi%2F10.1371%2Fjournal.pgen.1002230
dc.relation.alternativeid
info:eu-repo/semantics/altIdentifier/doi/http://dx.doi.org/10.1371/journal.pgen.1002230
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