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dc.contributor.author
Matthijnssens, Jelle
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dc.contributor.author
Ciarlet, Max
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McDonald, Sarah M.
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Attoui, Houssam
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Bányai, Krisztián
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Brister, J. Rodney
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Buesa, Javier
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Esona, Mathew D.
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Estes, Mary K.
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Gentsch, Jon R.
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Iturriza Gómara, Miren
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Johne, Reimar
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Kirkwood, Carl D.
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Martella, Vito
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Mertens, Peter P. C.
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Nakagomi, Osamu
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Parreño, Gladys Viviana
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Rahman, Mustafizur
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Ruggeri, Franco M.
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Saif, Linda J.
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Santos, Norma
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Steyer, Andrej
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Taniguchi, Koki
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Patton, John T.
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Desselberger, Ulrich
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van Ranst, Marc
dc.date.available
2023-04-14T15:15:36Z
dc.date.issued
2011-08
dc.identifier.citation
Matthijnssens, Jelle; Ciarlet, Max; McDonald, Sarah M.; Attoui, Houssam; Bányai, Krisztián; et al.; Uniformity of rotavirus strain nomenclature proposed by the Rotavirus Classification Working Group (RCWG); Springer Wien; Archives of Virology; 156; 8; 8-2011; 1397-1413
dc.identifier.issn
0304-8608
dc.identifier.uri
http://hdl.handle.net/11336/193872
dc.description.abstract
In April 2008, a nucleotide-sequence-based, complete genome classification system was developed for group A rotaviruses (RVs). This system assigns a specific genotype to each of the 11 genome segments of a particular RV strain according to established nucleotide percent cutoff values. Using this approach, the genome of individual RV strains are given the complete descriptor of Gx-P[x]-Ix-Rx-Cx-Mx-Ax-Nx-Tx-Ex-Hx. The Rotavirus Classification Working Group (RCWG) was formed by scientists in the field to maintain, evaluate and develop the RV genotype classification system, in particular to aid in the designation of new genotypes. Since its conception, the group has ratified 51 new genotypes: as of April 2011, new genotypes for VP7 (G20-G27), VP4 (P[28]-P[35]), VP6 (I12-I16), VP1 (R5-R9), VP2 (C6-C9), VP3 (M7-M8), NSP1 (A15-A16), NSP2 (N6-N9), NSP3 (T8-T12), NSP4 (E12-E14) and NSP5/6 (H7-H11) have been defined for RV strains recovered from humans, cows, pigs, horses, mice, South American camelids (guanaco), chickens, turkeys, pheasants, bats and a sugar glider. With increasing numbers of complete RV genome sequences becoming available, a standardized RV strain nomenclature system is needed, and the RCWG proposes that individual RV strains are named as follows: RV group/species of origin/country of identification/common name/year of identification/G- and P-type. In collaboration with the National Center for Biotechnology Information (NCBI), the RCWG is also working on developing a RV-specific resource for the deposition of nucleotide sequences. This resource will provide useful information regarding RV strains, including, but not limited to, the individual gene genotypes and epidemiological and clinical information. Together, the proposed nomenclature system and the NCBI RV resource will offer highly useful tools for investigators to search for, retrieve, and analyze the ever-growing volume of RV genomic data.
dc.format
application/pdf
dc.language.iso
eng
dc.publisher
Springer Wien
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dc.rights
info:eu-repo/semantics/openAccess
dc.rights.uri
https://creativecommons.org/licenses/by-nc-sa/2.5/ar/
dc.subject
ROTAVIRUS
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TAXONOMIA
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CONSTELACIÓN GENÓMICA
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Epidemiología
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dc.subject.classification
Ciencias de la Salud
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dc.subject.classification
CIENCIAS MÉDICAS Y DE LA SALUD
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dc.title
Uniformity of rotavirus strain nomenclature proposed by the Rotavirus Classification Working Group (RCWG)
dc.type
info:eu-repo/semantics/article
dc.type
info:ar-repo/semantics/artículo
dc.type
info:eu-repo/semantics/publishedVersion
dc.date.updated
2023-04-05T15:34:44Z
dc.journal.volume
156
dc.journal.number
8
dc.journal.pagination
1397-1413
dc.journal.pais
Austria
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dc.journal.ciudad
Viena
dc.description.fil
Fil: Matthijnssens, Jelle. Katholikie Universiteit Leuven; Bélgica
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Fil: Ciarlet, Max. Novartis Vaccines & Diagnostics; Estados Unidos
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Fil: McDonald, Sarah M.. National Institute Of Allegry & Infectious Diseases (niaid) ; National Institutes Of Health;
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Fil: Attoui, Houssam. Animal Health Trust.; Reino Unido
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Fil: Bányai, Krisztián. Hungarian Academy of Sciences; Hungría
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Fil: Brister, J. Rodney. National Library Of Medicine; Estados Unidos
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Fil: Buesa, Javier. Universidad de Valencia; España
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Fil: Esona, Mathew D.. Centers for Disease Control and Prevention; Estados Unidos
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Fil: Estes, Mary K.. Baylor College of Medicine; Estados Unidos
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Fil: Gentsch, Jon R.. Centers for Disease Control and Prevention; Estados Unidos
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Fil: Iturriza Gómara, Miren. Health Protection Agency; Reino Unido
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Fil: Johne, Reimar. Federal Institute for Risk Assessment; Alemania
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Fil: Kirkwood, Carl D.. Royal Children's Hospital; Australia
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Fil: Martella, Vito. Università degli Studi di Bari; Italia
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Fil: Mertens, Peter P. C.. Animal Health Trust.; Reino Unido
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Fil: Nakagomi, Osamu. Nagasaki University; Japón
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Fil: Parreño, Gladys Viviana. Consejo Nacional de Investigaciones Científicas y Técnicas; Argentina. Instituto Nacional de Tecnología Agropecuaria. Centro de Investigación en Ciencias Veterinarias y Agronómicas. Instituto de Virología; Argentina
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Fil: Rahman, Mustafizur. International Centre For Diarrhoeal Disease Research; Bangladesh
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Fil: Ruggeri, Franco M.. Istituto Superiore Di Sanita; Italia
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Fil: Saif, Linda J.. Ohio State University; Estados Unidos
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Fil: Santos, Norma. Universidade Federal do Rio de Janeiro; Brasil
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Fil: Steyer, Andrej. University of Ljubljan; Eslovenia
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Fil: Taniguchi, Koki. Fujita Health University School of Medicine; Japón
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Fil: Patton, John T.. National Institute Of Allegry & Infectious Diseases (niaid) ; National Institutes Of Health;
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Fil: Desselberger, Ulrich. University of Cambridge; Estados Unidos
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Fil: van Ranst, Marc. Katholikie Universiteit Leuven; Bélgica
dc.journal.title
Archives of Virology
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dc.relation.alternativeid
info:eu-repo/semantics/altIdentifier/url/https://link.springer.com/article/10.1007/s00705-011-1006-z
dc.relation.alternativeid
info:eu-repo/semantics/altIdentifier/doi/http://dx.doi.org/10.1007/s00705-011-1006-z
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