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dc.contributor.author
Goloboff, Pablo Augusto
dc.contributor.author
Szumik, Claudia Adriana
dc.date.available
2017-02-03T19:40:45Z
dc.date.issued
2015-07
dc.identifier.citation
Goloboff, Pablo Augusto; Szumik, Claudia Adriana; Identifying unstable taxa: Efficient implementation of triplet-based measures of stability, and comparison with Phyutility and RogueNaRok; Elsevier Inc; Molecular Phylogenetics And Evolution; 88; 7-2015; 93-104
dc.identifier.issn
1055-7903
dc.identifier.uri
http://hdl.handle.net/11336/12474
dc.description.abstract
This paper describes an efficient implementation of triplet-based measures of stability, in the program TNT. The only available implementations of such measures are much slower than the present one, either because of an inefficient implementation (Phyutility, Thor) or because the stability is evaluated with quartets (RogueNaRok, requiring O(t4), instead of the O(t3) possible for triplets). The method to quickly calculate triplets is applied to solving IterPCR (Pol and Escapa, 2009). It is shown that, in some cases, IterPCR or other algorithms in the program TNT (e.g. commands prunnelsen, prunmajor, or chkmoves) produce more informative results than analysis with RogueNaRok.
dc.format
application/pdf
dc.language.iso
eng
dc.publisher
Elsevier Inc
dc.rights
info:eu-repo/semantics/openAccess
dc.rights.uri
https://creativecommons.org/licenses/by-nc-nd/2.5/ar/
dc.subject
Reduced Consensus
dc.subject
Rogue Taxa
dc.subject
Unstable Taxa
dc.subject
Ambiguity
dc.subject
Phylogenetic Analysis
dc.subject.classification
Biología
dc.subject.classification
Ciencias Biológicas
dc.subject.classification
CIENCIAS NATURALES Y EXACTAS
dc.title
Identifying unstable taxa: Efficient implementation of triplet-based measures of stability, and comparison with Phyutility and RogueNaRok
dc.type
info:eu-repo/semantics/article
dc.type
info:ar-repo/semantics/artículo
dc.type
info:eu-repo/semantics/publishedVersion
dc.date.updated
2017-02-03T14:00:10Z
dc.journal.volume
88
dc.journal.pagination
93-104
dc.journal.pais
Países Bajos
dc.journal.ciudad
Amsterdam
dc.description.fil
Fil: Goloboff, Pablo Augusto. Consejo Nacional de Investigaciones Científico y Técnicas. Centro Científico Tecnológico Tucumán. Unidad Ejecutora Lillo; Argentina
dc.description.fil
Fil: Szumik, Claudia Adriana. Consejo Nacional de Investigaciones Científico y Técnicas. Centro Científico Tecnológico Tucumán. Unidad Ejecutora Lillo; Argentina
dc.journal.title
Molecular Phylogenetics And Evolution
dc.relation.alternativeid
info:eu-repo/semantics/altIdentifier/doi/http://dx.doi.org/10.1016/j.ympev.2015.04.003
dc.relation.alternativeid
info:eu-repo/semantics/altIdentifier/url/http://www.sciencedirect.com/science/article/pii/S1055790315000998
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